Index

A

Activation (class in dnnbrain.dnn.core) ActivationFile (class in dnnbrain.io.fileio)

Algorithm (class in dnnbrain.dnn.algo) array_statistic() (in module dnnbrain.dnn.base)

B

backprop() (dnnbrain.dnn.algo.SaliencyImage method) backprop_smooth() (dnnbrain.dnn.algo.SaliencyImage method)

BrainDecoder (class in dnnbrain.brain.core) BrainEncoder (class in dnnbrain.brain.core)

C

ceiling_RSA() (in module dnnbrain.utils.util) clear() (dnnbrain.dnn.core.Mask method) clustering() (in module dnnbrain.utils.util) combine_component() (dnnbrain.dnn.algo.MinimalComponentImage method) combine_parcel() (dnnbrain.dnn.algo.MinimalParcelImage method) compute() (dnnbrain.dnn.algo.EmpiricalReceptiveField method) (dnnbrain.dnn.algo.OccluderDiscrepancyMapping method) (dnnbrain.dnn.algo.TheoreticalReceptiveField method) (dnnbrain.dnn.algo.UpsamplingActivationMapping method)

compute_size() (dnnbrain.dnn.algo.TheoreticalReceptiveField method) concatenate() (dnnbrain.dnn.core.Activation method) convolve_hrf() (dnnbrain.dnn.core.Activation method) (in module dnnbrain.brain.algo) copy() (dnnbrain.dnn.core.Mask method) correlation_score() (in module dnnbrain.dnn.base) correlation_scorer() (in module dnnbrain.dnn.base) crop() (dnnbrain.dnn.base.ImageProcessor method) cross_val_confusion() (in module dnnbrain.dnn.base) cross_val_scores() (in module dnnbrain.dnn.base)

D

decode_behavior() (dnnbrain.brain.core.BrainDecoder method) decode_dnn() (dnnbrain.brain.core.BrainDecoder method) delete() (dnnbrain.brain.core.ROI method) (dnnbrain.dnn.core.Activation method) (dnnbrain.dnn.core.Mask method) (dnnbrain.dnn.core.Stimulus method) dnn_fe() (in module dnnbrain.dnn.base) dnn_mask() (in module dnnbrain.dnn.base) dnnbrain module dnnbrain.brain module dnnbrain.brain.algo module dnnbrain.brain.core module dnnbrain.brain.io module dnnbrain.dnn module

dnnbrain.dnn.algo module dnnbrain.dnn.base module dnnbrain.dnn.core module dnnbrain.io module dnnbrain.io.fileio module dnnbrain.utils module dnnbrain.utils.plot module dnnbrain.utils.util module dnnbrain.viz module DnnProbe (class in dnnbrain.dnn.core)

E

EmpiricalReceptiveField (class in dnnbrain.dnn.algo) encode_behavior() (dnnbrain.brain.core.BrainEncoder method)

encode_dnn() (dnnbrain.brain.core.BrainEncoder method) extract_brain_activation() (in module dnnbrain.brain.io)

F

fe() (dnnbrain.dnn.core.Activation method)

felzenszwalb_decompose() (dnnbrain.dnn.algo.MinimalParcelImage method) find_region() (dnnbrain.dnn.algo.TheoreticalReceptiveField method)

G

gen_dmask() (in module dnnbrain.utils.util) gen_estimator_from_name() (in module dnnbrain.dnn.base) generate_minimal_image() (dnnbrain.dnn.algo.MinimalComponentImage method) (dnnbrain.dnn.algo.MinimalParcelImage method) generate_rf() (dnnbrain.dnn.algo.EmpiricalReceptiveField method) get() (dnnbrain.brain.core.ROI method) (dnnbrain.dnn.core.Activation method) (dnnbrain.dnn.core.Mask method) (dnnbrain.dnn.core.RDM method) (dnnbrain.dnn.core.Stimulus method)

get_frame_time_info() (in module dnnbrain.utils.util) get_layer() (dnnbrain.dnn.algo.Algorithm method) GuidedSaliencyImage (class in dnnbrain.dnn.algo)

I

ica_decompose() (dnnbrain.dnn.algo.MinimalComponentImage method) ImageProcessor (class in dnnbrain.dnn.base)

ImageSet (class in dnnbrain.dnn.base) imgarray_show() (in module dnnbrain.utils.plot) items (dnnbrain.dnn.core.Stimulus property)

K

keys (dnnbrain.dnn.core.RDM property)

L

layers (dnnbrain.dnn.core.Activation property) (dnnbrain.dnn.core.Mask property) load() (dnnbrain.brain.core.ROI method) (dnnbrain.dnn.core.Activation method) (dnnbrain.dnn.core.Mask method) (dnnbrain.dnn.core.RDM method) (dnnbrain.dnn.core.Stimulus method)

load_brainimg() (in module dnnbrain.brain.io)

M

map() (dnnbrain.dnn.base.MultivariateMapping method) (dnnbrain.dnn.base.UnivariateMapping method) Mask (class in dnnbrain.dnn.core) mask() (dnnbrain.dnn.core.Activation method) MaskedImage (class in dnnbrain.dnn.algo) MaskFile (class in dnnbrain.io.fileio) MinimalComponentImage (class in dnnbrain.dnn.algo) MinimalParcelImage (class in dnnbrain.dnn.algo) module dnnbrain dnnbrain.brain dnnbrain.brain.algo dnnbrain.brain.core dnnbrain.brain.io dnnbrain.dnn dnnbrain.dnn.algo dnnbrain.dnn.base dnnbrain.dnn.core dnnbrain.io dnnbrain.io.fileio dnnbrain.utils dnnbrain.utils.plot dnnbrain.utils.util dnnbrain.viz

MultivariateMapping (class in dnnbrain.dnn.base)

N

n_item (dnnbrain.dnn.core.RDM property) norm() (dnnbrain.dnn.base.ImageProcessor method)

normalize() (in module dnnbrain.dnn.base) (in module dnnbrain.utils.util)

O

OccluderDiscrepancyMapping (class in dnnbrain.dnn.algo)

P

pca_decompose() (dnnbrain.dnn.algo.MinimalComponentImage method) permutate() (dnnbrain.dnn.core.Stimulus method) permutation_RSA() (in module dnnbrain.utils.util)

pool() (dnnbrain.dnn.core.Activation method) prepare_test() (dnnbrain.dnn.algo.MaskedImage method) probe() (dnnbrain.dnn.core.DnnProbe method) put_mask() (dnnbrain.dnn.algo.MaskedImage method)

Q

quickshift_decompose() (dnnbrain.dnn.algo.MinimalParcelImage method)

R

RDM (class in dnnbrain.dnn.core) RdmFile (class in dnnbrain.io.fileio) read() (dnnbrain.io.fileio.ActivationFile method) (dnnbrain.io.fileio.MaskFile method) (dnnbrain.io.fileio.RdmFile method) (dnnbrain.io.fileio.RoiFile method) (dnnbrain.io.fileio.StimulusFile method)

register_hooks() (dnnbrain.dnn.algo.GuidedSaliencyImage method) (dnnbrain.dnn.algo.MaskedImage method) (dnnbrain.dnn.algo.SaliencyImage method) (dnnbrain.dnn.algo.SynthesisImage method) (dnnbrain.dnn.algo.VanillaSaliencyImage method) resize() (dnnbrain.dnn.base.ImageProcessor method) ROI (class in dnnbrain.brain.core) RoiFile (class in dnnbrain.io.fileio)

S

SaliencyImage (class in dnnbrain.dnn.algo) save() (dnnbrain.brain.core.ROI method) (dnnbrain.dnn.core.Activation method) (dnnbrain.dnn.core.Mask method) (dnnbrain.dnn.core.RDM method) (dnnbrain.dnn.core.Stimulus method) save_brainimg() (in module dnnbrain.brain.io) set() (dnnbrain.brain.core.ROI method) (dnnbrain.dnn.core.Activation method) (dnnbrain.dnn.core.Mask method) (dnnbrain.dnn.core.RDM method) (dnnbrain.dnn.core.Stimulus method) set_activ() (dnnbrain.brain.core.BrainDecoder method) (dnnbrain.brain.core.BrainEncoder method) (dnnbrain.dnn.core.DnnProbe method) set_cv() (dnnbrain.dnn.base.MultivariateMapping method) (dnnbrain.dnn.base.UnivariateMapping method) set_estimator() (dnnbrain.dnn.base.MultivariateMapping method) (dnnbrain.dnn.base.UnivariateMapping method) set_layer() (dnnbrain.dnn.algo.Algorithm method) set_loss() (dnnbrain.dnn.algo.SynthesisImage method)

set_mapper() (dnnbrain.brain.core.BrainDecoder method) (dnnbrain.brain.core.BrainEncoder method) (dnnbrain.dnn.core.DnnProbe method) set_parameters() (dnnbrain.dnn.algo.MaskedImage method) (dnnbrain.dnn.algo.TheoreticalReceptiveField method) set_params() (dnnbrain.dnn.algo.EmpiricalReceptiveField method) (dnnbrain.dnn.algo.MinimalComponentImage method) (dnnbrain.dnn.algo.MinimalParcelImage method) (dnnbrain.dnn.algo.OccluderDiscrepancyMapping method) (dnnbrain.dnn.algo.UpsamplingActivationMapping method) set_precondition() (dnnbrain.dnn.algo.SynthesisImage method) set_scoring() (dnnbrain.dnn.base.MultivariateMapping method) (dnnbrain.dnn.base.UnivariateMapping method) set_smooth_gradient() (dnnbrain.dnn.algo.SynthesisImage method) slic_decompose() (dnnbrain.dnn.algo.MinimalParcelImage method) sort_componet() (dnnbrain.dnn.algo.MinimalComponentImage method) sort_parcel() (dnnbrain.dnn.algo.MinimalParcelImage method) Stimulus (class in dnnbrain.dnn.core) StimulusFile (class in dnnbrain.io.fileio) SynthesisImage (class in dnnbrain.dnn.algo) synthesize() (dnnbrain.dnn.algo.SynthesisImage method)

T

TheoreticalReceptiveField (class in dnnbrain.dnn.algo) to_array() (dnnbrain.dnn.base.ImageProcessor method) to_pil() (dnnbrain.dnn.base.ImageProcessor method)

to_tensor() (dnnbrain.dnn.base.ImageProcessor method) topk_accuracy() (in module dnnbrain.utils.util) total_variation() (dnnbrain.dnn.base.ImageProcessor method) translate() (dnnbrain.dnn.base.ImageProcessor method)

U

UnivariateMapping (class in dnnbrain.dnn.base)

UpsamplingActivationMapping (class in dnnbrain.dnn.algo)

V

VanillaSaliencyImage (class in dnnbrain.dnn.algo)

VideoClipSet (class in dnnbrain.dnn.base) VideoSet (class in dnnbrain.dnn.base)

W

write() (dnnbrain.io.fileio.ActivationFile method) (dnnbrain.io.fileio.MaskFile method) (dnnbrain.io.fileio.RdmFile method) (dnnbrain.io.fileio.RoiFile method) (dnnbrain.io.fileio.StimulusFile method)